ST Comparison
Our study comparing multiple spatial transcriptomics methods to map the human gut transcriptome is under review. Check back soon for more! Some of the raw files are provided below.
Data
Molecular Cartography
- MolecularCartography/B013_014_015_AH_output/Resolve_OCT_HE/230913_B013B014B015(left2right)_duodenumH.jpg
- MolecularCartography/B013_014_015_AH_output/Resolve_OCT_HE/230913_B013B014B015(left2right)_sigmoidA.jpg
- MolecularCartography/B013_014_015_AH_output/Resolve_run_20230918_sample_placement.tsv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W0A1/cells.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W0A1/features.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W0A1/raw_feature_bc_matrix.h5
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W0A1/transcripts.tsv.gz
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W0A2/cells.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W0A2/features.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W0A2/raw_feature_bc_matrix.h5
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W0A2/transcripts.tsv.gz
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W0A3/cells.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W0A3/features.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W0A3/raw_feature_bc_matrix.h5
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W0A3/transcripts.tsv.gz
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W1A1/cells.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W1A1/features.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W1A1/raw_feature_bc_matrix.h5
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W1A1/transcripts.tsv.gz
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W1A2/cells.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W1A2/features.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W1A2/raw_feature_bc_matrix.h5
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W1A2/transcripts.tsv.gz
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W2A1/cells.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W2A1/features.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W2A1/raw_feature_bc_matrix.h5
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W2A1/transcripts.tsv.gz
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W2A2/cells.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W2A2/features.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W2A2/raw_feature_bc_matrix.h5
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W2A2/transcripts.tsv.gz
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W3A2/cells.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W3A2/features.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W3A2/raw_feature_bc_matrix.h5
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W3A2/transcripts.tsv.gz
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W3A3/cells.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W3A3/features.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W3A3/raw_feature_bc_matrix.h5
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W3A3/transcripts.tsv.gz
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W3A4/cells.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W3A4/features.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W3A4/raw_feature_bc_matrix.h5
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W3A4/transcripts.tsv.gz
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W4A1/cells.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W4A1/features.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W4A1/raw_feature_bc_matrix.h5
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W4A1/transcripts.tsv.gz
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W4A2/cells.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W4A2/features.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W4A2/raw_feature_bc_matrix.h5
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W4A2/transcripts.tsv.gz
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W5A3/cells.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W5A3/features.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W5A3/raw_feature_bc_matrix.h5
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W5A3/transcripts.tsv.gz
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W5A4/cells.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W5A4/features.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W5A4/raw_feature_bc_matrix.h5
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W5A4/transcripts.tsv.gz
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W6A2/cells.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W6A2/features.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W6A2/raw_feature_bc_matrix.h5
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W6A2/transcripts.tsv.gz
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W6A3/cells.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W6A3/features.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W6A3/raw_feature_bc_matrix.h5
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W6A3/transcripts.tsv.gz
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W7A1/cells.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W7A1/features.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W7A1/raw_feature_bc_matrix.h5
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W7A1/transcripts.tsv.gz
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W7A2/cells.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W7A2/features.csv
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W7A2/raw_feature_bc_matrix.h5
- MolecularCartography/B013_014_015_AH_output/cell_counts/B013_014_015_AH_W7A2/transcripts.tsv.gz
- MolecularCartography/B013_014_015_AH_output/processed_data/Resolve_B013_B015.rds
- MolecularCartography/B013_014_015_AH_output/processed_data/cell_by_gene.csv.gz
- MolecularCartography/B013_014_015_AH_output/processed_data/cells.csv.gz
- MolecularCartography/B013_014_015_AH_output/processed_data/gene_by_cells.csv.gz
Xenium
- Xenium/B015-A-501d_A_0012524/B015-A-501d_A_0012524/aux_outputs/fov_locations.json
- Xenium/B015-A-501d_A_0012524/B015-A-501d_a_0012524_homographymatrix.csv
- Xenium/B015-A-501d_A_0012524/analysis.zarr.zip
- Xenium/B015-A-501d_A_0012524/analysis/clustering/gene_expression_graphclust/clusters.csv
- Xenium/B015-A-501d_A_0012524/analysis/clustering/gene_expression_kmeans_10_clusters/clusters.csv
- Xenium/B015-A-501d_A_0012524/analysis/clustering/gene_expression_kmeans_2_clusters/clusters.csv
- Xenium/B015-A-501d_A_0012524/analysis/clustering/gene_expression_kmeans_3_clusters/clusters.csv
- Xenium/B015-A-501d_A_0012524/analysis/clustering/gene_expression_kmeans_4_clusters/clusters.csv
- Xenium/B015-A-501d_A_0012524/analysis/clustering/gene_expression_kmeans_5_clusters/clusters.csv
- Xenium/B015-A-501d_A_0012524/analysis/clustering/gene_expression_kmeans_6_clusters/clusters.csv
- Xenium/B015-A-501d_A_0012524/analysis/clustering/gene_expression_kmeans_7_clusters/clusters.csv
- Xenium/B015-A-501d_A_0012524/analysis/clustering/gene_expression_kmeans_8_clusters/clusters.csv
- Xenium/B015-A-501d_A_0012524/analysis/clustering/gene_expression_kmeans_9_clusters/clusters.csv
- Xenium/B015-A-501d_A_0012524/analysis/diffexp/gene_expression_graphclust/differential_expression.csv
- Xenium/B015-A-501d_A_0012524/analysis/diffexp/gene_expression_kmeans_10_clusters/differential_expression.csv
- Xenium/B015-A-501d_A_0012524/analysis/diffexp/gene_expression_kmeans_2_clusters/differential_expression.csv
- Xenium/B015-A-501d_A_0012524/analysis/diffexp/gene_expression_kmeans_3_clusters/differential_expression.csv
- Xenium/B015-A-501d_A_0012524/analysis/diffexp/gene_expression_kmeans_4_clusters/differential_expression.csv
- Xenium/B015-A-501d_A_0012524/analysis/diffexp/gene_expression_kmeans_5_clusters/differential_expression.csv
- Xenium/B015-A-501d_A_0012524/analysis/diffexp/gene_expression_kmeans_6_clusters/differential_expression.csv
- Xenium/B015-A-501d_A_0012524/analysis/diffexp/gene_expression_kmeans_7_clusters/differential_expression.csv
- Xenium/B015-A-501d_A_0012524/analysis/diffexp/gene_expression_kmeans_8_clusters/differential_expression.csv
- Xenium/B015-A-501d_A_0012524/analysis/diffexp/gene_expression_kmeans_9_clusters/differential_expression.csv
- Xenium/B015-A-501d_A_0012524/analysis/pca/gene_expression_10_components/components.csv
- Xenium/B015-A-501d_A_0012524/analysis/pca/gene_expression_10_components/dispersion.csv
- Xenium/B015-A-501d_A_0012524/analysis/pca/gene_expression_10_components/features_selected.csv
- Xenium/B015-A-501d_A_0012524/analysis/pca/gene_expression_10_components/projection.csv
- Xenium/B015-A-501d_A_0012524/analysis/pca/gene_expression_10_components/variance.csv
- Xenium/B015-A-501d_A_0012524/analysis/umap/gene_expression_2_components/projection.csv
- Xenium/B015-A-501d_A_0012524/analysis_summary.html
- Xenium/B015-A-501d_A_0012524/cell_boundaries.csv.gz
- Xenium/B015-A-501d_A_0012524/cell_boundaries.parquet
- Xenium/B015-A-501d_A_0012524/cell_feature_matrix.h5
- Xenium/B015-A-501d_A_0012524/cell_feature_matrix.zarr.zip
- Xenium/B015-A-501d_A_0012524/cell_feature_matrix/barcodes.tsv.gz
- Xenium/B015-A-501d_A_0012524/cell_feature_matrix/features.tsv.gz
- Xenium/B015-A-501d_A_0012524/cell_feature_matrix/matrix.mtx.gz
- Xenium/B015-A-501d_A_0012524/cells.csv.gz
- Xenium/B015-A-501d_A_0012524/cells.parquet
- Xenium/B015-A-501d_A_0012524/cells.zarr.zip
- Xenium/B015-A-501d_A_0012524/experiment.xenium
- Xenium/B015-A-501d_A_0012524/gene_panel.json
- Xenium/B015-A-501d_A_0012524/metrics_summary.csv
- Xenium/B015-A-501d_A_0012524/morphology.ome.tif
- Xenium/B015-A-501d_A_0012524/morphology_focus.ome.tif
- Xenium/B015-A-501d_A_0012524/morphology_mip.ome.tif
- Xenium/B015-A-501d_A_0012524/nucleus_boundaries.csv.gz
- Xenium/B015-A-501d_A_0012524/nucleus_boundaries.parquet
- Xenium/B015-A-501d_A_0012524/registered_B015-A-501d_a_0012524.ome.tif
- Xenium/B015-A-501d_A_0012524/transcripts.csv.gz
- Xenium/B015-A-501d_A_0012524/transcripts.parquet
- Xenium/B015-A-501d_A_0012524/transcripts.zarr.zip
- Xenium/B015-A-501d_A_0012524/unregistered_B015-A-501d_a_0012524.ome.tif
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/.end-of-run
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis.zarr.zip
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis/clustering/gene_expression_graphclust/clusters.csv
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis/clustering/gene_expression_kmeans_10_clusters/clusters.csv
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis/clustering/gene_expression_kmeans_2_clusters/clusters.csv
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis/clustering/gene_expression_kmeans_3_clusters/clusters.csv
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis/clustering/gene_expression_kmeans_4_clusters/clusters.csv
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis/clustering/gene_expression_kmeans_5_clusters/clusters.csv
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis/clustering/gene_expression_kmeans_6_clusters/clusters.csv
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis/clustering/gene_expression_kmeans_7_clusters/clusters.csv
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis/clustering/gene_expression_kmeans_8_clusters/clusters.csv
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis/clustering/gene_expression_kmeans_9_clusters/clusters.csv
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis/diffexp/gene_expression_graphclust/differential_expression.csv
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis/diffexp/gene_expression_kmeans_10_clusters/differential_expression.csv
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis/diffexp/gene_expression_kmeans_2_clusters/differential_expression.csv
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis/diffexp/gene_expression_kmeans_3_clusters/differential_expression.csv
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis/diffexp/gene_expression_kmeans_4_clusters/differential_expression.csv
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis/diffexp/gene_expression_kmeans_5_clusters/differential_expression.csv
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis/diffexp/gene_expression_kmeans_6_clusters/differential_expression.csv
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis/diffexp/gene_expression_kmeans_7_clusters/differential_expression.csv
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis/diffexp/gene_expression_kmeans_8_clusters/differential_expression.csv
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis/diffexp/gene_expression_kmeans_9_clusters/differential_expression.csv
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis/pca/gene_expression_10_components/components.csv
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis/pca/gene_expression_10_components/dispersion.csv
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis/pca/gene_expression_10_components/features_selected.csv
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis/pca/gene_expression_10_components/projection.csv
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis/pca/gene_expression_10_components/variance.csv
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis/umap/gene_expression_2_components/projection.csv
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/analysis_summary.html
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/aux_outputs/fov_locations.json
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/aux_outputs/per_cycle_channel_images/cycle_01_blu.tiff
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/aux_outputs/per_cycle_channel_images/cycle_01_grn.tiff
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/aux_outputs/per_cycle_channel_images/cycle_01_red.tiff
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/aux_outputs/per_cycle_channel_images/cycle_01_yel.tiff
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/aux_outputs/per_cycle_channel_images/cycle_02_blu.tiff
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/aux_outputs/per_cycle_channel_images/cycle_02_grn.tiff
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/aux_outputs/per_cycle_channel_images/cycle_02_red.tiff
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/aux_outputs/per_cycle_channel_images/cycle_02_yel.tiff
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/aux_outputs/per_cycle_channel_images/cycle_03_blu.tiff
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/aux_outputs/per_cycle_channel_images/cycle_03_grn.tiff
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/aux_outputs/per_cycle_channel_images/cycle_03_red.tiff
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/aux_outputs/per_cycle_channel_images/cycle_03_yel.tiff
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/aux_outputs/per_cycle_channel_images/cycle_04_blu.tiff
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/aux_outputs/per_cycle_channel_images/cycle_04_grn.tiff
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/aux_outputs/per_cycle_channel_images/cycle_04_red.tiff
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/aux_outputs/per_cycle_channel_images/cycle_04_yel.tiff
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/aux_outputs/per_cycle_channel_images/cycle_05_blu.tiff
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/aux_outputs/per_cycle_channel_images/cycle_05_grn.tiff
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/aux_outputs/per_cycle_channel_images/cycle_05_red.tiff
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/aux_outputs/per_cycle_channel_images/cycle_05_yel.tiff
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/aux_outputs/per_cycle_channel_images/cycle_06_blu.tiff
- Xenium/output-XETG00102__0011850__B015_duodenum_FF__20230927__000425/aux_outputs/per_cycle_channel_images/cycle_06_grn.tiff
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- MERFISH/region_1-B014-H3/images/manifest.json
- MERFISH/region_1-B014-H3/images/micron_to_mosaic_pixel_transform.csv
- MERFISH/region_1-B014-H3/images/mosaic_ACTG2_z0.tif
- MERFISH/region_1-B014-H3/images/mosaic_ACTG2_z1.tif
- MERFISH/region_1-B014-H3/images/mosaic_ACTG2_z2.tif
- MERFISH/region_1-B014-H3/images/mosaic_ACTG2_z3.tif
- MERFISH/region_1-B014-H3/images/mosaic_ACTG2_z4.tif
- MERFISH/region_1-B014-H3/images/mosaic_ACTG2_z5.tif
- MERFISH/region_1-B014-H3/images/mosaic_ACTG2_z6.tif
- MERFISH/region_1-B014-H3/images/mosaic_APOE_z0.tif
- MERFISH/region_1-B014-H3/images/mosaic_APOE_z1.tif
- MERFISH/region_1-B014-H3/images/mosaic_APOE_z2.tif
- MERFISH/region_1-B014-H3/images/mosaic_APOE_z3.tif
- MERFISH/region_1-B014-H3/images/mosaic_APOE_z4.tif
- MERFISH/region_1-B014-H3/images/mosaic_APOE_z5.tif
- MERFISH/region_1-B014-H3/images/mosaic_APOE_z6.tif
- MERFISH/region_1-B014-H3/images/mosaic_Cellbound1_z0.tif
- MERFISH/region_1-B014-H3/images/mosaic_Cellbound1_z1.tif
- MERFISH/region_1-B014-H3/images/mosaic_Cellbound1_z2.tif
- MERFISH/region_1-B014-H3/images/mosaic_Cellbound1_z3.tif
- MERFISH/region_1-B014-H3/images/mosaic_Cellbound1_z4.tif
- MERFISH/region_1-B014-H3/images/mosaic_Cellbound1_z5.tif
- MERFISH/region_1-B014-H3/images/mosaic_Cellbound1_z6.tif
- MERFISH/region_1-B014-H3/images/mosaic_Cellbound2_z0.tif
- MERFISH/region_1-B014-H3/images/mosaic_Cellbound2_z1.tif
- MERFISH/region_1-B014-H3/images/mosaic_Cellbound2_z2.tif
- MERFISH/region_1-B014-H3/images/mosaic_Cellbound2_z3.tif
- MERFISH/region_1-B014-H3/images/mosaic_Cellbound2_z4.tif
- MERFISH/region_1-B014-H3/images/mosaic_Cellbound2_z5.tif
- MERFISH/region_1-B014-H3/images/mosaic_Cellbound2_z6.tif
- MERFISH/region_1-B014-H3/images/mosaic_Cellbound3_z0.tif
- MERFISH/region_1-B014-H3/images/mosaic_Cellbound3_z1.tif
- MERFISH/region_1-B014-H3/images/mosaic_Cellbound3_z2.tif
- MERFISH/region_1-B014-H3/images/mosaic_Cellbound3_z3.tif
- MERFISH/region_1-B014-H3/images/mosaic_Cellbound3_z4.tif
- MERFISH/region_1-B014-H3/images/mosaic_Cellbound3_z5.tif
- MERFISH/region_1-B014-H3/images/mosaic_Cellbound3_z6.tif
- MERFISH/region_1-B014-H3/images/mosaic_DAPI_z0.tif
- MERFISH/region_1-B014-H3/images/mosaic_DAPI_z1.tif
- MERFISH/region_1-B014-H3/images/mosaic_DAPI_z2.tif
- MERFISH/region_1-B014-H3/images/mosaic_DAPI_z3.tif
- MERFISH/region_1-B014-H3/images/mosaic_DAPI_z4.tif
- MERFISH/region_1-B014-H3/images/mosaic_DAPI_z5.tif
- MERFISH/region_1-B014-H3/images/mosaic_DAPI_z6.tif
- MERFISH/region_1-B014-H3/images/mosaic_DES_z0.tif
- MERFISH/region_1-B014-H3/images/mosaic_DES_z1.tif
- MERFISH/region_1-B014-H3/images/mosaic_DES_z2.tif
- MERFISH/region_1-B014-H3/images/mosaic_DES_z3.tif
- MERFISH/region_1-B014-H3/images/mosaic_DES_z4.tif
- MERFISH/region_1-B014-H3/images/mosaic_DES_z5.tif
- MERFISH/region_1-B014-H3/images/mosaic_DES_z6.tif
- MERFISH/region_1-B014-H3/images/mosaic_ERBB2_z0.tif
- MERFISH/region_1-B014-H3/images/mosaic_ERBB2_z1.tif
- MERFISH/region_1-B014-H3/images/mosaic_ERBB2_z2.tif
- MERFISH/region_1-B014-H3/images/mosaic_ERBB2_z3.tif
- MERFISH/region_1-B014-H3/images/mosaic_ERBB2_z4.tif
- MERFISH/region_1-B014-H3/images/mosaic_ERBB2_z5.tif
- MERFISH/region_1-B014-H3/images/mosaic_ERBB2_z6.tif
- MERFISH/region_1-B014-H3/images/mosaic_NEAT1_z0.tif
- MERFISH/region_1-B014-H3/images/mosaic_NEAT1_z1.tif
- MERFISH/region_1-B014-H3/images/mosaic_NEAT1_z2.tif
- MERFISH/region_1-B014-H3/images/mosaic_NEAT1_z3.tif
- MERFISH/region_1-B014-H3/images/mosaic_NEAT1_z4.tif
- MERFISH/region_1-B014-H3/images/mosaic_NEAT1_z5.tif
- MERFISH/region_1-B014-H3/images/mosaic_NEAT1_z6.tif
- MERFISH/region_1-B014-H3/images/mosaic_PolyT_z0.tif
- MERFISH/region_1-B014-H3/images/mosaic_PolyT_z1.tif
- MERFISH/region_1-B014-H3/images/mosaic_PolyT_z2.tif
- MERFISH/region_1-B014-H3/images/mosaic_PolyT_z3.tif
- MERFISH/region_1-B014-H3/images/mosaic_PolyT_z4.tif
- MERFISH/region_1-B014-H3/images/mosaic_PolyT_z5.tif
- MERFISH/region_1-B014-H3/images/mosaic_PolyT_z6.tif
- MERFISH/region_1-B014-H3/images/mosaic_VIM_z0.tif
- MERFISH/region_1-B014-H3/images/mosaic_VIM_z1.tif
- MERFISH/region_1-B014-H3/images/mosaic_VIM_z2.tif
- MERFISH/region_1-B014-H3/images/mosaic_VIM_z3.tif
- MERFISH/region_1-B014-H3/images/mosaic_VIM_z4.tif
- MERFISH/region_1-B014-H3/images/mosaic_VIM_z5.tif
- MERFISH/region_1-B014-H3/images/mosaic_VIM_z6.tif
- MERFISH/region_1-B014-H3/summary.png
CosMx
- CosMx/B015-Duodenum/20230622_211729_S4_C902_P99_N99_F026.TIF
- CosMx/B015-Duodenum/20230622_211729_S4_C902_P99_N99_F027.TIF
- CosMx/B015-Duodenum/20230622_211729_S4_C902_P99_N99_F028.TIF
- CosMx/B015-Duodenum/20230622_211729_S4_C902_P99_N99_F029.TIF
- CosMx/B015-Duodenum/20230622_211729_S4_C902_P99_N99_F030.TIF
- CosMx/B015-Duodenum/20230622_211729_S4_C902_P99_N99_F031.TIF
- CosMx/B015-Duodenum/20230622_211729_S4_C902_P99_N99_F032.TIF
- CosMx/B015-Duodenum/20230622_211729_S4_C902_P99_N99_F033.TIF
- CosMx/B015-Duodenum/20230622_211729_S4_C902_P99_N99_F034.TIF
- CosMx/B015-Duodenum/20230622_211729_S4_C902_P99_N99_F035.TIF
- CosMx/B015-Duodenum/20230622_211729_S4_C902_P99_N99_F036.TIF
- CosMx/B015-Duodenum/20230622_211729_S4_C902_P99_N99_F037.TIF
- CosMx/B015-Duodenum/20230622_211729_S4_C902_P99_N99_F038.TIF
- CosMx/B015-Duodenum/20230622_211729_S4_C902_P99_N99_F039.TIF
- CosMx/B015-Duodenum/20230622_211729_S4_C902_P99_N99_F040.TIF
- CosMx/B015-Duodenum/20230622_211729_S4_C902_P99_N99_F041.TIF
- CosMx/B015-Duodenum/20230622_211729_S4_C902_P99_N99_F042.TIF
- CosMx/B015-Duodenum/20230622_211729_S4_C902_P99_N99_F043.TIF
- CosMx/B015-Duodenum/20230622_211729_S4_C902_P99_N99_F044.TIF
- CosMx/B015-Duodenum/20230622_211729_S4_C902_P99_N99_F045.TIF
- CosMx/B015-Duodenum/20230622_211729_S4_C902_P99_N99_F046.TIF
- CosMx/B015-Duodenum/20230622_211729_S4_C902_P99_N99_F047.TIF
- CosMx/B015-Duodenum/B015-Duodenum-polygons.csv
- CosMx/B015-Duodenum/B015-Duodenum_exprMat_file.csv
- CosMx/B015-Duodenum/B015-Duodenum_fov_positions_file.csv
- CosMx/B015-Duodenum/B015-Duodenum_metadata_file.csv
- CosMx/B015-Duodenum/B015-Duodenum_tx_file.csv
Links in text format
We provide the link addresses in text format (organized by assay) to facilitate programmatic transfer here.
Globus Access
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